Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXP3Q9BZS1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
FOXP3Q9BZS1 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXP3Q9BZS1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXP3Q9BZS1 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.57■□□□□ 0.08
FOXP3Q9BZS1 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXP3Q9BZS1 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXP3Q9BZS1 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 AC114501.2-201ENST00000439631 535 ntBASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 MIR6752-201ENST00000618442 71 ntBASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 SLC7A15P-201ENST00000424028 1363 ntBASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXP3Q9BZS1 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 AC022447.6-201ENST00000515522 438 ntBASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 TPRX2P-201ENST00000535362 881 ntBASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 SRD5A3P1-201ENST00000603021 949 ntBASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 AC005840.4-201ENST00000541242 2494 ntBASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 AL354702.1-201ENST00000442006 1960 ntBASIC15.55■□□□□ 0.08
FOXP3Q9BZS1 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
FOXP3Q9BZS1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms