Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.79□□□□□ -0.04
NPAS2Q99743 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.79□□□□□ -0.04
NPAS2Q99743 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 SRD5A3P1-201ENST00000603021 949 ntBASIC14.79□□□□□ -0.04
NPAS2Q99743 AC239800.4-201ENST00000603712 296 ntBASIC14.79□□□□□ -0.04
NPAS2Q99743 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 AC092135.3-201ENST00000624151 1846 ntBASIC14.79□□□□□ -0.04
NPAS2Q99743 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 AC067750.1-201ENST00000608826 6545 ntBASIC14.78□□□□□ -0.04
NPAS2Q99743 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
NPAS2Q99743 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 FO393414.2-201ENST00000405153 598 ntBASIC14.78□□□□□ -0.04
NPAS2Q99743 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 AC005034.1-201ENST00000426657 489 ntBASIC14.78□□□□□ -0.04
NPAS2Q99743 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.78□□□□□ -0.04
NPAS2Q99743 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.78□□□□□ -0.04
NPAS2Q99743 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 AL035252.4-201ENST00000624174 288 ntBASIC14.78□□□□□ -0.04
NPAS2Q99743 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.78□□□□□ -0.04
NPAS2Q99743 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.78□□□□□ -0.04
NPAS2Q99743 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NPAS2Q99743 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NPAS2Q99743 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.77□□□□□ -0.04
NPAS2Q99743 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.77□□□□□ -0.04
NPAS2Q99743 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
NPAS2Q99743 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.77□□□□□ -0.04
NPAS2Q99743 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
NPAS2Q99743 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NPAS2Q99743 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
NPAS2Q99743 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NPAS2Q99743 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.77□□□□□ -0.05
NPAS2Q99743 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NPAS2Q99743 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.77□□□□□ -0.05
NPAS2Q99743 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms