Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 RIN2-201ENST00000255006 4505 ntAPPRIS P2 TSL 2 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 AC106820.4-201ENST00000561847 5616 ntBASIC10.04□□□□□ -0.8
SIGMAR1Q99720 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 AL132642.2-201ENST00000623423 1998 ntBASIC10.04□□□□□ -0.8
SIGMAR1Q99720 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SIGMAR1Q99720 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AL031731.1-201ENST00000642131 2094 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 FAM102A-203ENST00000373095 4144 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 CH25H-201ENST00000371852 1686 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 MYCLP1-201ENST00000372451 1075 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 MIR1238-201ENST00000408483 83 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 TSPY12P-201ENST00000421279 868 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AL390955.1-201ENST00000428694 934 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC003958.1-201ENST00000435883 421 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 RBM17P1-201ENST00000453646 1190 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC128688.1-201ENST00000487626 519 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC113404.2-201ENST00000507884 177 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 REXO2-216ENST00000544196 452 ntTSL 3 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC142381.4-202ENST00000563973 229 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 USF2-205ENST00000594064 1179 ntTSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC010653.2-201ENST00000623505 997 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AL157888.1-201ENST00000631930 593 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 AC080128.2-201ENST00000641520 11863 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 GPR89P-201ENST00000407924 1495 ntBASIC10.03□□□□□ -0.8
SIGMAR1Q99720 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.03□□□□□ -0.8
SIGMAR1Q99720 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.8
SIGMAR1Q99720 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SIGMAR1Q99720 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SIGMAR1Q99720 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SIGMAR1Q99720 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC10.02□□□□□ -0.81
SIGMAR1Q99720 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SIGMAR1Q99720 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms