Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 MIR4525-201ENST00000580000 75 ntBASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDK5RAP1Q96SZ6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AL354877.1-201ENST00000424412 413 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 FAM58BP-201ENST00000439056 645 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AC108725.1-201ENST00000495472 409 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AC131206.1-201ENST00000538078 1211 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AC104982.3-201ENST00000581995 514 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AL022328.3-201ENST00000607943 679 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AL358472.3-201ENST00000608147 415 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AC005695.3-201ENST00000614522 232 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AGAP7P-201ENST00000582299 2062 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AGAP14-201ENST00000624701 2060 ntBASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CDK5RAP1Q96SZ6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 INE2-201ENST00000630399 1874 ntBASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC010141.1-201ENST00000411585 623 ntBASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 AC100850.1-201ENST00000506768 649 ntBASIC15.53■□□□□ 0.08
CDK5RAP1Q96SZ6 GCOM2-201ENST00000509133 1104 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms