Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 AC131212.3-201ENST00000624087 4219 ntBASIC13.17□□□□□ -0.3
CPNE2Q96FN4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CPNE2Q96FN4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 COL6A4P2-202ENST00000504443 2753 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AC125807.1-201ENST00000483097 614 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AC112482.1-201ENST00000492080 688 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AC067863.1-201ENST00000494933 530 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AC069120.2-201ENST00000524091 540 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AC025678.2-201ENST00000562061 970 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 AC079781.4-201ENST00000641908 219 ntBASIC13.16□□□□□ -0.3
CPNE2Q96FN4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CPNE2Q96FN4 STRCP1-201ENST00000509801 5328 ntBASIC13.15□□□□□ -0.3
CPNE2Q96FN4 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 INTS4P1-203ENST00000641008 3683 ntBASIC13.15□□□□□ -0.3
CPNE2Q96FN4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 SPDYE12P-201ENST00000618416 771 ntBASIC13.15□□□□□ -0.3
CPNE2Q96FN4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 AC006504.5-208ENST00000588784 2401 ntBASIC13.15□□□□□ -0.3
CPNE2Q96FN4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CPNE2Q96FN4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms