Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FAM90A21P-201ENST00000510875 1396 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FAM90A15P-201ENST00000514465 1395 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FAM90A6P-201ENST00000515148 1394 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FAM90A16P-201ENST00000526662 1395 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FAM90A9P-201ENST00000527940 1395 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FAM90A5P-201ENST00000528738 1395 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FAM90A14P-201ENST00000530386 1395 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FAM90A13P-201ENST00000534703 1395 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 AL512306.1-201ENST00000432698 848 ntBASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRIM43Q96BQ3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 RN7SKP109-201ENST00000410592 316 ntBASIC16■□□□□ 0.15
TRIM43Q96BQ3 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 RPL35P9-201ENST00000446059 350 ntBASIC16■□□□□ 0.15
TRIM43Q96BQ3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 AC068867.1-201ENST00000559855 150 ntBASIC16■□□□□ 0.15
TRIM43Q96BQ3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRIM43Q96BQ3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16■□□□□ 0.15
TRIM43Q96BQ3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 AC021305.1-201ENST00000520656 1514 ntBASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRIM43Q96BQ3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms