Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 HLA-H-201ENST00000383620 1096 ntBASIC13.28□□□□□ -0.28
AP3S1Q92572 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S1Q92572 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S1Q92572 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S1Q92572 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S1Q92572 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S1Q92572 AC091304.2-201ENST00000564639 760 ntBASIC13.28□□□□□ -0.28
AP3S1Q92572 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.28□□□□□ -0.28
AP3S1Q92572 AC004899.2-201ENST00000622993 3860 ntBASIC13.28□□□□□ -0.28
AP3S1Q92572 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
AP3S1Q92572 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
AP3S1Q92572 FAM90A12P-201ENST00000519497 2375 ntBASIC13.28□□□□□ -0.28
AP3S1Q92572 FAM90A24P-201ENST00000520792 2369 ntBASIC13.28□□□□□ -0.28
AP3S1Q92572 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.28□□□□□ -0.28
AP3S1Q92572 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
AP3S1Q92572 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
AP3S1Q92572 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
AP3S1Q92572 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S1Q92572 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S1Q92572 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S1Q92572 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.27□□□□□ -0.28
AP3S1Q92572 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.27□□□□□ -0.28
AP3S1Q92572 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S1Q92572 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
AP3S1Q92572 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.27□□□□□ -0.28
AP3S1Q92572 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.27□□□□□ -0.28
AP3S1Q92572 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 AC211429.1-201ENST00000415277 523 ntBASIC13.27□□□□□ -0.29
AP3S1Q92572 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.27□□□□□ -0.29
AP3S1Q92572 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.27□□□□□ -0.29
AP3S1Q92572 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.27□□□□□ -0.29
AP3S1Q92572 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.27□□□□□ -0.29
AP3S1Q92572 AC117500.6-201ENST00000624871 588 ntBASIC13.27□□□□□ -0.29
AP3S1Q92572 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
AP3S1Q92572 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
AP3S1Q92572 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
AP3S1Q92572 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.27□□□□□ -0.29
AP3S1Q92572 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
AP3S1Q92572 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.27□□□□□ -0.29
AP3S1Q92572 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
AP3S1Q92572 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
AP3S1Q92572 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
AP3S1Q92572 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AP3S1Q92572 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.27□□□□□ -0.29
AP3S1Q92572 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.27□□□□□ -0.29
AP3S1Q92572 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.26□□□□□ -0.29
AP3S1Q92572 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
AP3S1Q92572 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AP3S1Q92572 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms