Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 AC090643.2-201ENST00000623442 2029 ntBASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 AC011840.2-201ENST00000563063 1520 ntBASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.87□□□□□ -0.35
SMIM4Q8WVI0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AL157414.3-201ENST00000624276 1954 ntBASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.86□□□□□ -0.35
SMIM4Q8WVI0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM4Q8WVI0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms