Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC38A9Q8NBW4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AC005740.2-201ENST00000511085 419 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AC022217.1-201ENST00000521069 738 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AC100827.2-201ENST00000563214 1194 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AC004923.1-202ENST00000642106 209 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 TUBBP5-203ENST00000508529 1334 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 SALL4P5-201ENST00000419001 1760 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 AC073347.1-201ENST00000421633 2643 ntBASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC38A9Q8NBW4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC38A9Q8NBW4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SLC38A9Q8NBW4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SLC38A9Q8NBW4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.08□□□□□ -0.15
SLC38A9Q8NBW4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC38A9Q8NBW4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.08□□□□□ -0.15
SLC38A9Q8NBW4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SLC38A9Q8NBW4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SLC38A9Q8NBW4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms