Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 ARL4AP4-201ENST00000434170 518 ntBASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 MTND6P24-201ENST00000440466 518 ntBASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AC097493.3-201ENST00000509725 367 ntBASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 MIR4745-201ENST00000577608 62 ntBASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AC006213.4-201ENST00000616184 634 ntBASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 CETN4P-206ENST00000642099 2168 ntBASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 AC012508.2-201ENST00000567613 1472 ntBASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
DEPDC4Q8N2C3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AC018529.2-202ENST00000611482 3087 ntBASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AC018442.1-201ENST00000421439 2061 ntBASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AL356585.2-201ENST00000625078 2396 ntBASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AC005562.1-201ENST00000583030 3219 ntBASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AC015802.1-201ENST00000588104 1449 ntBASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 AC097359.2-201ENST00000604992 2389 ntBASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 DGCR9-201ENST00000609630 2415 ntBASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
DEPDC4Q8N2C3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
DEPDC4Q8N2C3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms