Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 AC007274.1-201ENST00000439805 662 ntBASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 CHMP1AP1-201ENST00000445563 662 ntBASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 AL355994.2-201ENST00000447882 704 ntBASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 AC002472.3-201ENST00000640124 621 ntBASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 AC007292.2-201ENST00000593524 1812 ntBASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
C9orf40Q8IXQ3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 HIST2H2BB-201ENST00000449108 381 ntBASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 GCOM2-201ENST00000509133 1104 ntBASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 RN7SL560P-201ENST00000577943 264 ntBASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 EEF1DP1-201ENST00000585891 896 ntBASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 AL358472.3-201ENST00000608147 415 ntBASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
C9orf40Q8IXQ3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 MTHFR-210ENST00000641407 2387 ntBASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
C9orf40Q8IXQ3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms