Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 AC005252.3-201ENST00000623855 2258 ntBASIC16.36■□□□□ 0.21
CNGA4Q8IV77 AL137784.3-201ENST00000623858 2288 ntBASIC16.36■□□□□ 0.21
CNGA4Q8IV77 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 AL353779.1-201ENST00000434793 351 ntBASIC16.36■□□□□ 0.21
CNGA4Q8IV77 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.36■□□□□ 0.21
CNGA4Q8IV77 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CNGA4Q8IV77 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 KRT8P24-201ENST00000560290 1559 ntBASIC16.35■□□□□ 0.21
CNGA4Q8IV77 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 AL022342.1-201ENST00000400363 863 ntBASIC16.35■□□□□ 0.21
CNGA4Q8IV77 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 ZNF890P-202ENST00000530367 1156 ntBASIC16.35■□□□□ 0.21
CNGA4Q8IV77 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 AC092337.1-201ENST00000568699 1129 ntBASIC16.35■□□□□ 0.21
CNGA4Q8IV77 MIR3687-2-201ENST00000577708 61 ntBASIC16.35■□□□□ 0.21
CNGA4Q8IV77 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 MIR3687-1-201ENST00000614492 61 ntBASIC16.35■□□□□ 0.21
CNGA4Q8IV77 AL158212.4-201ENST00000624062 1286 ntBASIC16.35■□□□□ 0.21
CNGA4Q8IV77 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.35■□□□□ 0.21
CNGA4Q8IV77 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.34■□□□□ 0.21
CNGA4Q8IV77 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNGA4Q8IV77 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CNGA4Q8IV77 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNGA4Q8IV77 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CNGA4Q8IV77 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNGA4Q8IV77 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNGA4Q8IV77 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms