Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 AC007292.2-201ENST00000593524 1812 ntBASIC10.07□□□□□ -0.8
SCXQ7RTU7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
SCXQ7RTU7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SCXQ7RTU7 LINC00528-201ENST00000600723 2160 ntBASIC10.07□□□□□ -0.8
SCXQ7RTU7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC136621.1-201ENST00000624017 2304 ntBASIC10.06□□□□□ -0.8
SCXQ7RTU7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 MIR658-201ENST00000385210 100 ntBASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC234783.1-201ENST00000441761 496 ntBASIC10.06□□□□□ -0.8
SCXQ7RTU7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC106886.1-201ENST00000568660 600 ntBASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AL158212.4-201ENST00000624062 1286 ntBASIC10.06□□□□□ -0.8
SCXQ7RTU7 CDC14C-201ENST00000428251 1719 ntBASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC006486.2-201ENST00000624246 2199 ntBASIC10.06□□□□□ -0.8
SCXQ7RTU7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AC004899.2-201ENST00000622993 3860 ntBASIC10.06□□□□□ -0.8
SCXQ7RTU7 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC10.06□□□□□ -0.8
SCXQ7RTU7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
SCXQ7RTU7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SCXQ7RTU7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SCXQ7RTU7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC10.05□□□□□ -0.8
SCXQ7RTU7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SCXQ7RTU7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms