Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 AL080243.2-201ENST00000418783 582 ntBASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 RN7SL618P-201ENST00000477850 296 ntBASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 AC087481.3-201ENST00000602886 1894 ntBASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM53Q6P2H8 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 BX324167.2-201ENST00000623717 3316 ntBASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 AZGP1P1-201ENST00000411909 902 ntBASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 RPL37AP1-201ENST00000412502 279 ntBASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 TEX28P1-201ENST00000613479 1221 ntBASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 TEX28P2-201ENST00000617764 1221 ntBASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 AC093512.1-201ENST00000617969 520 ntBASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 AL033527.5-202ENST00000641632 1098 ntBASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.9□□□□□ -0.18
TMEM53Q6P2H8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TMEM53Q6P2H8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TMEM53Q6P2H8 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
TMEM53Q6P2H8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TMEM53Q6P2H8 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TMEM53Q6P2H8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TMEM53Q6P2H8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms