Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 AC117500.6-201ENST00000624871 588 ntBASIC14.2□□□□□ -0.14
LPCAT4Q643R3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
LPCAT4Q643R3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 MIR1224-201ENST00000408193 85 ntBASIC14.19□□□□□ -0.14
LPCAT4Q643R3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 VN2R19P-201ENST00000442399 1052 ntBASIC14.19□□□□□ -0.14
LPCAT4Q643R3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 AC108751.1-201ENST00000490852 363 ntBASIC14.19□□□□□ -0.14
LPCAT4Q643R3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 RNPS1P1-201ENST00000507437 918 ntBASIC14.19□□□□□ -0.14
LPCAT4Q643R3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 AL161645.1-201ENST00000622716 1255 ntBASIC14.19□□□□□ -0.14
LPCAT4Q643R3 TP73-AS1-207ENST00000624167 988 ntBASIC14.19□□□□□ -0.14
LPCAT4Q643R3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.19□□□□□ -0.14
LPCAT4Q643R3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 RHOQP3-201ENST00000437982 621 ntBASIC14.18□□□□□ -0.14
LPCAT4Q643R3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.18□□□□□ -0.14
LPCAT4Q643R3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms