Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 ENPP7P14-201ENST00000621765 1040 ntBASIC17.43■□□□□ 0.38
SSRP1Q08945 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.43■□□□□ 0.38
SSRP1Q08945 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.43■□□□□ 0.38
SSRP1Q08945 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.43■□□□□ 0.38
SSRP1Q08945 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSRP1Q08945 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SSRP1Q08945 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSRP1Q08945 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
SSRP1Q08945 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SSRP1Q08945 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSRP1Q08945 SALL4P5-201ENST00000419001 1760 ntBASIC17.43■□□□□ 0.38
SSRP1Q08945 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SSRP1Q08945 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.42■□□□□ 0.38
SSRP1Q08945 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SSRP1Q08945 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.42■□□□□ 0.38
SSRP1Q08945 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SSRP1Q08945 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.42■□□□□ 0.38
SSRP1Q08945 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SSRP1Q08945 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 POM121L8P-201ENST00000417732 1281 ntBASIC17.42■□□□□ 0.38
SSRP1Q08945 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.42■□□□□ 0.38
SSRP1Q08945 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.42■□□□□ 0.38
SSRP1Q08945 POM121L9P-203ENST00000441984 1285 ntBASIC17.42■□□□□ 0.38
SSRP1Q08945 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 RN7SL48P-201ENST00000579283 293 ntBASIC17.42■□□□□ 0.38
SSRP1Q08945 GNRHR2-203ENST00000581100 1187 ntBASIC17.42■□□□□ 0.38
SSRP1Q08945 BTNL10-201ENST00000595971 695 ntBASIC17.42■□□□□ 0.38
SSRP1Q08945 AC233724.13-201ENST00000598383 410 ntBASIC17.42■□□□□ 0.38
SSRP1Q08945 LINC02084-201ENST00000606069 1096 ntBASIC17.42■□□□□ 0.38
SSRP1Q08945 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.42■□□□□ 0.38
SSRP1Q08945 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 AC003102.2-201ENST00000589195 1469 ntBASIC17.42■□□□□ 0.38
SSRP1Q08945 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.42■□□□□ 0.38
SSRP1Q08945 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSRP1Q08945 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
SSRP1Q08945 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 AC092933.1-201ENST00000393644 945 ntBASIC17.41■□□□□ 0.38
SSRP1Q08945 TLE1P1-201ENST00000422965 589 ntBASIC17.41■□□□□ 0.38
SSRP1Q08945 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.41■□□□□ 0.38
SSRP1Q08945 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.41■□□□□ 0.38
SSRP1Q08945 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.41■□□□□ 0.38
SSRP1Q08945 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.41■□□□□ 0.38
SSRP1Q08945 AC025279.2-201ENST00000569730 653 ntBASIC17.41■□□□□ 0.38
SSRP1Q08945 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.41■□□□□ 0.38
SSRP1Q08945 AL022328.1-201ENST00000610050 478 ntBASIC17.41■□□□□ 0.38
SSRP1Q08945 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 AC132938.4-201ENST00000623835 848 ntBASIC17.41■□□□□ 0.38
SSRP1Q08945 AC097376.2-205ENST00000610159 5334 ntBASIC17.41■□□□□ 0.38
SSRP1Q08945 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 CLUHP2-201ENST00000426660 1303 ntBASIC17.41■□□□□ 0.38
SSRP1Q08945 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.41■□□□□ 0.38
SSRP1Q08945 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSRP1Q08945 AC113367.3-201ENST00000508316 1912 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms