Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 HLA-V-204ENST00000476601 1289 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC109322.1-201ENST00000524499 1264 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC025678.2-201ENST00000562061 970 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC015910.1-201ENST00000579400 975 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC025048.3-201ENST00000590609 569 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC005702.4-201ENST00000618393 416 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC073592.8-201ENST00000624126 511 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 AL139385.1-201ENST00000611744 3272 ntBASIC11.61□□□□□ -0.55
HIST1H1AQ02539 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
HIST1H1AQ02539 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 Z97205.2-201ENST00000564697 1639 ntBASIC11.6□□□□□ -0.55
HIST1H1AQ02539 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AC015922.1-201ENST00000421102 1152 ntBASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 KRT18P64-201ENST00000434946 1219 ntBASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AC069120.2-201ENST00000524091 540 ntBASIC11.6□□□□□ -0.55
HIST1H1AQ02539 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AL138828.2-201ENST00000615812 383 ntBASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AL691403.2-201ENST00000618460 490 ntBASIC11.6□□□□□ -0.55
HIST1H1AQ02539 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.6□□□□□ -0.55
HIST1H1AQ02539 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms