Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC10.42□□□□□ -0.74
PRKDCP78527 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC10.42□□□□□ -0.74
PRKDCP78527 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.42□□□□□ -0.74
PRKDCP78527 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
PRKDCP78527 LINC00265-2P-201ENST00000413372 782 ntBASIC10.42□□□□□ -0.74
PRKDCP78527 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC10.42□□□□□ -0.74
PRKDCP78527 ASS1P2-201ENST00000439895 1223 ntBASIC10.42□□□□□ -0.74
PRKDCP78527 TPT1P11-201ENST00000458482 498 ntBASIC10.42□□□□□ -0.74
PRKDCP78527 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 MIR4459-201ENST00000581837 66 ntBASIC10.42□□□□□ -0.74
PRKDCP78527 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
PRKDCP78527 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.42□□□□□ -0.74
PRKDCP78527 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PRKDCP78527 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC10.42□□□□□ -0.74
PRKDCP78527 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC10.41□□□□□ -0.74
PRKDCP78527 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC10.41□□□□□ -0.74
PRKDCP78527 FAM21EP-201ENST00000417804 985 ntBASIC10.41□□□□□ -0.74
PRKDCP78527 OR52V1P-201ENST00000515557 898 ntBASIC10.41□□□□□ -0.74
PRKDCP78527 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC10.41□□□□□ -0.74
PRKDCP78527 AC011270.2-201ENST00000624293 2550 ntBASIC10.41□□□□□ -0.74
PRKDCP78527 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.41□□□□□ -0.74
PRKDCP78527 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.41□□□□□ -0.74
PRKDCP78527 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC10.41□□□□□ -0.74
PRKDCP78527 PPY-202ENST00000587006 431 ntTSL 3 BASIC10.41□□□□□ -0.74
PRKDCP78527 URAHP-205ENST00000610227 398 ntBASIC10.41□□□□□ -0.74
PRKDCP78527 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 PAX6-247ENST00000638965 979 ntTSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 LINC01101-201ENST00000622953 1884 ntBASIC10.41□□□□□ -0.74
PRKDCP78527 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC10.41□□□□□ -0.74
PRKDCP78527 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC10.41□□□□□ -0.74
PRKDCP78527 SUPT20HL2-201ENST00000486479 2409 ntBASIC10.41□□□□□ -0.74
PRKDCP78527 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.41□□□□□ -0.74
PRKDCP78527 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC10.41□□□□□ -0.74
PRKDCP78527 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC10.41□□□□□ -0.74
PRKDCP78527 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC10.41□□□□□ -0.74
PRKDCP78527 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC10.41□□□□□ -0.74
PRKDCP78527 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 AL365181.1-201ENST00000564032 1828 ntBASIC10.41□□□□□ -0.74
PRKDCP78527 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PRKDCP78527 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
PRKDCP78527 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PRKDCP78527 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PRKDCP78527 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
PRKDCP78527 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
PRKDCP78527 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PRKDCP78527 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PRKDCP78527 CICP13-201ENST00000422015 2789 ntBASIC10.4□□□□□ -0.74
PRKDCP78527 AC079325.1-201ENST00000430386 857 ntBASIC10.4□□□□□ -0.74
PRKDCP78527 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC10.4□□□□□ -0.74
PRKDCP78527 UGT1A12P-201ENST00000447084 853 ntBASIC10.4□□□□□ -0.74
PRKDCP78527 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC10.4□□□□□ -0.74
PRKDCP78527 AC132812.1-201ENST00000583145 892 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms