Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RIPK4P57078 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 Z93015.1-201ENST00000451718 390 ntBASIC19.59■□□□□ 0.73
RIPK4P57078 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK4P57078 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.59■□□□□ 0.73
RIPK4P57078 AC131206.1-201ENST00000538078 1211 ntBASIC19.59■□□□□ 0.73
RIPK4P57078 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.59■□□□□ 0.73
RIPK4P57078 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
RIPK4P57078 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 AP001002.3-201ENST00000623482 206 ntBASIC19.59■□□□□ 0.73
RIPK4P57078 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.59■□□□□ 0.73
RIPK4P57078 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK4P57078 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK4P57078 AC013726.1-201ENST00000563747 2285 ntBASIC19.59■□□□□ 0.73
RIPK4P57078 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
RIPK4P57078 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC19.59■□□□□ 0.73
RIPK4P57078 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC19.59■□□□□ 0.73
RIPK4P57078 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK4P57078 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.58■□□□□ 0.73
RIPK4P57078 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK4P57078 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK4P57078 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK4P57078 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.58■□□□□ 0.73
RIPK4P57078 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RIPK4P57078 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RIPK4P57078 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC19.58■□□□□ 0.73
RIPK4P57078 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC19.58■□□□□ 0.73
RIPK4P57078 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK4P57078 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK4P57078 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.58■□□□□ 0.73
RIPK4P57078 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK4P57078 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK4P57078 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.58■□□□□ 0.73
RIPK4P57078 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RIPK4P57078 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
RIPK4P57078 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.58■□□□□ 0.72
RIPK4P57078 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RIPK4P57078 BRWD1P1-201ENST00000401091 371 ntBASIC19.58■□□□□ 0.72
RIPK4P57078 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.58■□□□□ 0.72
RIPK4P57078 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.58■□□□□ 0.72
RIPK4P57078 AC092658.1-201ENST00000505836 891 ntBASIC19.58■□□□□ 0.72
RIPK4P57078 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC19.58■□□□□ 0.72
RIPK4P57078 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.58■□□□□ 0.72
RIPK4P57078 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
RIPK4P57078 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.58■□□□□ 0.72
RIPK4P57078 MIR4538-201ENST00000581377 78 ntBASIC19.58■□□□□ 0.72
RIPK4P57078 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.58■□□□□ 0.72
RIPK4P57078 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.58■□□□□ 0.72
RIPK4P57078 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.58■□□□□ 0.72
RIPK4P57078 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.58■□□□□ 0.72
RIPK4P57078 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK4P57078 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.58■□□□□ 0.72
RIPK4P57078 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK4P57078 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC19.58■□□□□ 0.72
RIPK4P57078 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK4P57078 CICP14-201ENST00000629111 2732 ntBASIC19.58■□□□□ 0.72
RIPK4P57078 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK4P57078 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK4P57078 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RIPK4P57078 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
RIPK4P57078 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RIPK4P57078 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RIPK4P57078 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RIPK4P57078 BTBD6P1-201ENST00000412176 1267 ntBASIC19.57■□□□□ 0.72
RIPK4P57078 MTX1P1-201ENST00000440904 838 ntBASIC19.57■□□□□ 0.72
RIPK4P57078 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 CDC23-208ENST00000505120 455 ntTSL 3 BASIC19.57■□□□□ 0.72
RIPK4P57078 GCOM2-201ENST00000509133 1104 ntBASIC19.57■□□□□ 0.72
RIPK4P57078 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.57■□□□□ 0.72
RIPK4P57078 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.57■□□□□ 0.72
RIPK4P57078 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.57■□□□□ 0.72
RIPK4P57078 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.57■□□□□ 0.72
RIPK4P57078 AC244157.2-201ENST00000616239 1006 ntBASIC19.57■□□□□ 0.72
RIPK4P57078 MIR6799-201ENST00000620297 69 ntBASIC19.57■□□□□ 0.72
RIPK4P57078 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.57■□□□□ 0.72
RIPK4P57078 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.57■□□□□ 0.72
RIPK4P57078 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RIPK4P57078 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms