Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.93■□□□□ 0.3
EPHB4P54760 MAGEA5-201ENST00000446757 942 ntBASIC16.93■□□□□ 0.3
EPHB4P54760 EEF1DP6-201ENST00000449232 372 ntBASIC16.93■□□□□ 0.3
EPHB4P54760 SERPINA13P-202ENST00000478994 924 ntBASIC16.93■□□□□ 0.3
EPHB4P54760 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHB4P54760 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHB4P54760 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.93■□□□□ 0.3
EPHB4P54760 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
EPHB4P54760 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.93■□□□□ 0.3
EPHB4P54760 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHB4P54760 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
EPHB4P54760 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
EPHB4P54760 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.93■□□□□ 0.3
EPHB4P54760 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.93■□□□□ 0.3
EPHB4P54760 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.93■□□□□ 0.3
EPHB4P54760 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
EPHB4P54760 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EPHB4P54760 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB4P54760 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EPHB4P54760 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EPHB4P54760 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
EPHB4P54760 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EPHB4P54760 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.92■□□□□ 0.3
EPHB4P54760 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB4P54760 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB4P54760 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.92■□□□□ 0.3
EPHB4P54760 RN7SL11P-201ENST00000471305 293 ntBASIC16.92■□□□□ 0.3
EPHB4P54760 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.92■□□□□ 0.3
EPHB4P54760 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHB4P54760 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.92■□□□□ 0.3
EPHB4P54760 RN7SL555P-201ENST00000584742 339 ntBASIC16.92■□□□□ 0.3
EPHB4P54760 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB4P54760 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EPHB4P54760 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
EPHB4P54760 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EPHB4P54760 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHB4P54760 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHB4P54760 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHB4P54760 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHB4P54760 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
EPHB4P54760 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHB4P54760 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHB4P54760 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
EPHB4P54760 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHB4P54760 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHB4P54760 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHB4P54760 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHB4P54760 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHB4P54760 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.91■□□□□ 0.3
EPHB4P54760 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 AL355334.1-201ENST00000417713 215 ntBASIC16.91■□□□□ 0.3
EPHB4P54760 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.91■□□□□ 0.3
EPHB4P54760 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.91■□□□□ 0.3
EPHB4P54760 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.91■□□□□ 0.3
EPHB4P54760 AC005730.2-201ENST00000564549 1184 ntBASIC16.91■□□□□ 0.3
EPHB4P54760 MIR3147-201ENST00000577811 66 ntBASIC16.91■□□□□ 0.3
EPHB4P54760 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHB4P54760 BX539320.1-201ENST00000623759 877 ntBASIC16.91■□□□□ 0.3
EPHB4P54760 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHB4P54760 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
EPHB4P54760 CICP23-201ENST00000605013 2741 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms