Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HMGA2P52926 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.7□□□□□ -0.22
HMGA2P52926 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 CICP17-201ENST00000418553 2377 ntBASIC13.69□□□□□ -0.22
HMGA2P52926 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 AC003102.2-201ENST00000589195 1469 ntBASIC13.69□□□□□ -0.22
HMGA2P52926 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.69□□□□□ -0.22
HMGA2P52926 TSSK5P-201ENST00000423978 907 ntBASIC13.69□□□□□ -0.22
HMGA2P52926 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 RN7SL399P-201ENST00000471648 279 ntBASIC13.69□□□□□ -0.22
HMGA2P52926 AC125807.1-201ENST00000483097 614 ntBASIC13.69□□□□□ -0.22
HMGA2P52926 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.69□□□□□ -0.22
HMGA2P52926 AC026434.2-201ENST00000506094 1078 ntBASIC13.69□□□□□ -0.22
HMGA2P52926 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.69□□□□□ -0.22
HMGA2P52926 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.69□□□□□ -0.22
HMGA2P52926 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
HMGA2P52926 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.69□□□□□ -0.22
HMGA2P52926 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 AL049840.4-201ENST00000602422 811 ntBASIC13.69□□□□□ -0.22
HMGA2P52926 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.69□□□□□ -0.22
HMGA2P52926 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
HMGA2P52926 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.69□□□□□ -0.22
HMGA2P52926 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HMGA2P52926 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 SALL4P5-201ENST00000419001 1760 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HMGA2P52926 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HMGA2P52926 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 AC023794.5-201ENST00000564380 2157 ntBASIC13.68□□□□□ -0.22
HMGA2P52926 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.68□□□□□ -0.22
HMGA2P52926 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGA2P52926 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HMGA2P52926 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGA2P52926 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms