Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX2-1P43699 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX2-1P43699 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.38□□□□□ -0.43
NKX2-1P43699 KRT8P23-201ENST00000560090 1207 ntBASIC12.38□□□□□ -0.43
NKX2-1P43699 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 AC106730.1-201ENST00000566722 1090 ntBASIC12.38□□□□□ -0.43
NKX2-1P43699 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.38□□□□□ -0.43
NKX2-1P43699 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.38□□□□□ -0.43
NKX2-1P43699 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 STRCP1-201ENST00000509801 5328 ntBASIC12.38□□□□□ -0.43
NKX2-1P43699 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
NKX2-1P43699 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
NKX2-1P43699 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
NKX2-1P43699 AL354702.1-201ENST00000442006 1960 ntBASIC12.38□□□□□ -0.43
NKX2-1P43699 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.38□□□□□ -0.43
NKX2-1P43699 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX2-1P43699 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NKX2-1P43699 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NKX2-1P43699 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX2-1P43699 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NKX2-1P43699 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.37□□□□□ -0.43
NKX2-1P43699 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.37□□□□□ -0.43
NKX2-1P43699 AL353705.2-201ENST00000428243 662 ntBASIC12.37□□□□□ -0.43
NKX2-1P43699 HIST3H2BA-201ENST00000436555 524 ntBASIC12.37□□□□□ -0.43
NKX2-1P43699 KRT18P2-201ENST00000447938 1258 ntBASIC12.37□□□□□ -0.43
NKX2-1P43699 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.37□□□□□ -0.43
NKX2-1P43699 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.37□□□□□ -0.43
NKX2-1P43699 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.37□□□□□ -0.43
NKX2-1P43699 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.37□□□□□ -0.43
NKX2-1P43699 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 AC018665.1-201ENST00000622927 1362 ntBASIC12.37□□□□□ -0.43
NKX2-1P43699 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX2-1P43699 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.37□□□□□ -0.43
NKX2-1P43699 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NKX2-1P43699 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
NKX2-1P43699 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.37□□□□□ -0.43
NKX2-1P43699 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NKX2-1P43699 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
NKX2-1P43699 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.36□□□□□ -0.43
NKX2-1P43699 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.36□□□□□ -0.43
NKX2-1P43699 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-1P43699 PCDHA5-203ENST00000614258 4248 ntBASIC12.36□□□□□ -0.43
NKX2-1P43699 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-1P43699 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-1P43699 AC130686.1-201ENST00000622936 2466 ntBASIC12.36□□□□□ -0.43
NKX2-1P43699 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-1P43699 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-1P43699 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-1P43699 AC016397.2-201ENST00000624848 1985 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms