Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCNN1AP37088 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.56■□□□□ 0.08
SCNN1AP37088 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.56■□□□□ 0.08
SCNN1AP37088 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCNN1AP37088 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
SCNN1AP37088 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SCNN1AP37088 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SCNN1AP37088 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 AC139712.1-201ENST00000378256 1875 ntBASIC15.55■□□□□ 0.08
SCNN1AP37088 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
SCNN1AP37088 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.55■□□□□ 0.08
SCNN1AP37088 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.55■□□□□ 0.08
SCNN1AP37088 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.55■□□□□ 0.08
SCNN1AP37088 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SCNN1AP37088 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SCNN1AP37088 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.55■□□□□ 0.08
SCNN1AP37088 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.55■□□□□ 0.08
SCNN1AP37088 MIR6074-201ENST00000612054 107 ntBASIC15.55■□□□□ 0.08
SCNN1AP37088 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.55■□□□□ 0.08
SCNN1AP37088 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.55■□□□□ 0.08
SCNN1AP37088 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.55■□□□□ 0.08
SCNN1AP37088 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SCNN1AP37088 FER1L4-210ENST00000615531 5998 ntBASIC15.55■□□□□ 0.08
SCNN1AP37088 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SCNN1AP37088 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.55■□□□□ 0.08
SCNN1AP37088 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SCNN1AP37088 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.55■□□□□ 0.08
SCNN1AP37088 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.55■□□□□ 0.08
SCNN1AP37088 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.54■□□□□ 0.08
SCNN1AP37088 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.54■□□□□ 0.08
SCNN1AP37088 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 ANKRD19P-201ENST00000338192 862 ntBASIC15.54■□□□□ 0.08
SCNN1AP37088 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 AC010141.1-201ENST00000411585 623 ntBASIC15.54■□□□□ 0.08
SCNN1AP37088 AC026954.1-201ENST00000429771 1293 ntBASIC15.54■□□□□ 0.08
SCNN1AP37088 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.54■□□□□ 0.08
SCNN1AP37088 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.54■□□□□ 0.08
SCNN1AP37088 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.54■□□□□ 0.08
SCNN1AP37088 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 AP005482.1-201ENST00000563722 1273 ntBASIC15.54■□□□□ 0.08
SCNN1AP37088 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.54■□□□□ 0.08
SCNN1AP37088 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.54■□□□□ 0.08
SCNN1AP37088 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.54■□□□□ 0.08
SCNN1AP37088 LINC02228-204ENST00000642115 2962 ntBASIC15.54■□□□□ 0.08
SCNN1AP37088 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SCNN1AP37088 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SCNN1AP37088 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.54■□□□□ 0.08
SCNN1AP37088 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SCNN1AP37088 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 NORAD-201ENST00000565493 5339 ntBASIC15.54■□□□□ 0.08
SCNN1AP37088 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SCNN1AP37088 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SCNN1AP37088 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms