Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
HOXC8P31273 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 AL583805.1-201ENST00000391389 531 ntBASIC16.09■□□□□ 0.17
HOXC8P31273 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.09■□□□□ 0.17
HOXC8P31273 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.09■□□□□ 0.17
HOXC8P31273 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC8P31273 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC8P31273 AC114947.1-202ENST00000514136 344 ntBASIC16.09■□□□□ 0.17
HOXC8P31273 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.09■□□□□ 0.17
HOXC8P31273 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.09■□□□□ 0.17
HOXC8P31273 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.09■□□□□ 0.17
HOXC8P31273 AC093752.3-201ENST00000567343 901 ntBASIC16.09■□□□□ 0.17
HOXC8P31273 AC124068.2-201ENST00000569473 1109 ntBASIC16.09■□□□□ 0.17
HOXC8P31273 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 RN7SL736P-201ENST00000613111 269 ntBASIC16.09■□□□□ 0.17
HOXC8P31273 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
HOXC8P31273 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.09■□□□□ 0.17
HOXC8P31273 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.09■□□□□ 0.17
HOXC8P31273 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HOXC8P31273 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.08■□□□□ 0.17
HOXC8P31273 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
HOXC8P31273 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC8P31273 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC8P31273 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
HOXC8P31273 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC8P31273 AC022532.1-201ENST00000624563 1728 ntBASIC16.08■□□□□ 0.17
HOXC8P31273 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC8P31273 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC8P31273 AC011270.2-201ENST00000624293 2550 ntBASIC16.08■□□□□ 0.17
HOXC8P31273 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
HOXC8P31273 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.08■□□□□ 0.17
HOXC8P31273 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HOXC8P31273 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC8P31273 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.08■□□□□ 0.16
HOXC8P31273 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.08■□□□□ 0.16
HOXC8P31273 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.08■□□□□ 0.16
HOXC8P31273 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.08■□□□□ 0.16
HOXC8P31273 RPL17P45-201ENST00000586289 509 ntBASIC16.08■□□□□ 0.16
HOXC8P31273 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HOXC8P31273 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 KRT18P9-201ENST00000604826 1300 ntBASIC16.08■□□□□ 0.16
HOXC8P31273 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC8P31273 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC8P31273 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.08■□□□□ 0.16
HOXC8P31273 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.08■□□□□ 0.16
HOXC8P31273 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HOXC8P31273 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HOXC8P31273 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 CICP6-201ENST00000457191 2729 ntBASIC16.07■□□□□ 0.16
HOXC8P31273 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HOXC8P31273 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.07■□□□□ 0.16
HOXC8P31273 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
HOXC8P31273 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms