Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.08■□□□□ 0.16
SYN1P17600 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SYN1P17600 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYN1P17600 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.08■□□□□ 0.16
SYN1P17600 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC16.08■□□□□ 0.16
SYN1P17600 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 AL135901.1-201ENST00000451812 333 ntBASIC16.08■□□□□ 0.16
SYN1P17600 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.08■□□□□ 0.16
SYN1P17600 AC063952.3-201ENST00000467756 308 ntBASIC16.08■□□□□ 0.16
SYN1P17600 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.08■□□□□ 0.16
SYN1P17600 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SYN1P17600 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 AC068867.1-201ENST00000559855 150 ntBASIC16.08■□□□□ 0.16
SYN1P17600 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.08■□□□□ 0.16
SYN1P17600 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.08■□□□□ 0.16
SYN1P17600 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYN1P17600 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYN1P17600 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.08■□□□□ 0.16
SYN1P17600 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYN1P17600 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYN1P17600 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.08■□□□□ 0.16
SYN1P17600 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYN1P17600 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
SYN1P17600 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SYN1P17600 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SYN1P17600 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SYN1P17600 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SYN1P17600 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.07■□□□□ 0.16
SYN1P17600 AC108734.2-201ENST00000420887 1069 ntBASIC16.07■□□□□ 0.16
SYN1P17600 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.07■□□□□ 0.16
SYN1P17600 ERP29P1-201ENST00000442902 706 ntBASIC16.07■□□□□ 0.16
SYN1P17600 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.07■□□□□ 0.16
SYN1P17600 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.07■□□□□ 0.16
SYN1P17600 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC16.07■□□□□ 0.16
SYN1P17600 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SYN1P17600 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.07■□□□□ 0.16
SYN1P17600 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.07■□□□□ 0.16
SYN1P17600 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.07■□□□□ 0.16
SYN1P17600 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SYN1P17600 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYN1P17600 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SYN1P17600 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SYN1P17600 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SYN1P17600 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 TMBIM7P-202ENST00000641474 1516 ntBASIC16.06■□□□□ 0.16
SYN1P17600 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.06■□□□□ 0.16
SYN1P17600 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SYN1P17600 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SYN1P17600 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SYN1P17600 ACTG1P19-201ENST00000418987 1116 ntBASIC16.06■□□□□ 0.16
SYN1P17600 AC004522.1-201ENST00000419978 654 ntBASIC16.06■□□□□ 0.16
SYN1P17600 OR51A9P-201ENST00000422578 911 ntBASIC16.06■□□□□ 0.16
SYN1P17600 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 AL512306.1-201ENST00000432698 848 ntBASIC16.06■□□□□ 0.16
SYN1P17600 RN7SL530P-201ENST00000485097 298 ntBASIC16.06■□□□□ 0.16
SYN1P17600 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.06■□□□□ 0.16
SYN1P17600 AC140113.1-201ENST00000603467 169 ntBASIC16.06■□□□□ 0.16
SYN1P17600 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYN1P17600 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms