Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CYP3A4P08684 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CYP3A4P08684 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.75■□□□□ 0.27
CYP3A4P08684 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CYP3A4P08684 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CYP3A4P08684 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.75■□□□□ 0.27
CYP3A4P08684 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 TUBB8P8-201ENST00000458717 1058 ntBASIC16.75■□□□□ 0.27
CYP3A4P08684 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 ZNF767P-206ENST00000513792 565 ntBASIC16.75■□□□□ 0.27
CYP3A4P08684 AC126915.1-201ENST00000522847 1038 ntBASIC16.75■□□□□ 0.27
CYP3A4P08684 AC100827.2-201ENST00000563214 1194 ntBASIC16.75■□□□□ 0.27
CYP3A4P08684 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.75■□□□□ 0.27
CYP3A4P08684 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.75■□□□□ 0.27
CYP3A4P08684 AL022328.3-201ENST00000607943 679 ntBASIC16.75■□□□□ 0.27
CYP3A4P08684 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CYP3A4P08684 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.75■□□□□ 0.27
CYP3A4P08684 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CYP3A4P08684 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
CYP3A4P08684 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.74■□□□□ 0.27
CYP3A4P08684 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CYP3A4P08684 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.74■□□□□ 0.27
CYP3A4P08684 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.74■□□□□ 0.27
CYP3A4P08684 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CYP3A4P08684 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.74■□□□□ 0.27
CYP3A4P08684 KLF2P1-201ENST00000447438 1042 ntBASIC16.74■□□□□ 0.27
CYP3A4P08684 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.74■□□□□ 0.27
CYP3A4P08684 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.74■□□□□ 0.27
CYP3A4P08684 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.74■□□□□ 0.27
CYP3A4P08684 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.74■□□□□ 0.27
CYP3A4P08684 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 MIR4525-201ENST00000580000 75 ntBASIC16.74■□□□□ 0.27
CYP3A4P08684 BNIP3P13-201ENST00000599968 566 ntBASIC16.74■□□□□ 0.27
CYP3A4P08684 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.74■□□□□ 0.27
CYP3A4P08684 Z98259.2-201ENST00000641583 609 ntBASIC16.74■□□□□ 0.27
CYP3A4P08684 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.74■□□□□ 0.27
CYP3A4P08684 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.74■□□□□ 0.27
CYP3A4P08684 MTHFR-210ENST00000641407 2387 ntBASIC16.74■□□□□ 0.27
CYP3A4P08684 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CYP3A4P08684 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.74■□□□□ 0.27
CYP3A4P08684 KHSRPP1-201ENST00000427983 1768 ntBASIC16.74■□□□□ 0.27
CYP3A4P08684 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.74■□□□□ 0.27
CYP3A4P08684 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CYP3A4P08684 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CYP3A4P08684 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CYP3A4P08684 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CYP3A4P08684 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CYP3A4P08684 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CYP3A4P08684 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.73■□□□□ 0.27
CYP3A4P08684 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms