Protein–RNA interactions for Protein: P07199

CENPB, Major centromere autoantigen B, humanhuman

Predicted RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBP07199 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.66■□□□□ 0.9
CENPBP07199 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 AP002414.4-201ENST00000589764 1148 ntBASIC20.66■□□□□ 0.9
CENPBP07199 MTDHP3-201ENST00000594186 672 ntBASIC20.66■□□□□ 0.9
CENPBP07199 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CENPBP07199 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.66■□□□□ 0.9
CENPBP07199 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.66■□□□□ 0.9
CENPBP07199 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.66■□□□□ 0.9
CENPBP07199 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CENPBP07199 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CENPBP07199 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC20.65■□□□□ 0.9
CENPBP07199 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
CENPBP07199 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CENPBP07199 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPBP07199 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CENPBP07199 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPBP07199 DDC-213ENST00000617822 1809 ntTSL 3 BASIC20.65■□□□□ 0.9
CENPBP07199 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPBP07199 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.65■□□□□ 0.9
CENPBP07199 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 MRPL20P1-201ENST00000400819 433 ntBASIC20.65■□□□□ 0.9
CENPBP07199 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.65■□□□□ 0.9
CENPBP07199 SART3-203ENST00000546611 1184 ntBASIC20.65■□□□□ 0.9
CENPBP07199 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.65■□□□□ 0.9
CENPBP07199 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CENPBP07199 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.65■□□□□ 0.9
CENPBP07199 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 VENTXP1-201ENST00000569334 2716 ntBASIC20.65■□□□□ 0.9
CENPBP07199 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC20.65■□□□□ 0.9
CENPBP07199 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CENPBP07199 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC20.64■□□□□ 0.9
CENPBP07199 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CENPBP07199 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CENPBP07199 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
CENPBP07199 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CENPBP07199 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CENPBP07199 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CENPBP07199 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CENPBP07199 AC005332.1-201ENST00000577698 1310 ntBASIC20.64■□□□□ 0.89
CENPBP07199 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
CENPBP07199 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CENPBP07199 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 RCN1P1-201ENST00000400413 996 ntBASIC20.64■□□□□ 0.89
CENPBP07199 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CENPBP07199 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.64■□□□□ 0.89
CENPBP07199 AC092474.2-201ENST00000424288 719 ntBASIC20.64■□□□□ 0.89
CENPBP07199 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CENPBP07199 AL513480.1-201ENST00000451731 511 ntBASIC20.64■□□□□ 0.89
CENPBP07199 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 AC098859.1-201ENST00000502915 1238 ntBASIC20.64■□□□□ 0.89
CENPBP07199 IGHV3-65-201ENST00000523210 341 ntBASIC20.64■□□□□ 0.89
CENPBP07199 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPBP07199 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPBP07199 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.64■□□□□ 0.89
CENPBP07199 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.64■□□□□ 0.89
CENPBP07199 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 AC106818.1-201ENST00000623223 3242 ntBASIC20.64■□□□□ 0.89
CENPBP07199 KHSRPP1-201ENST00000427983 1768 ntBASIC20.64■□□□□ 0.89
CENPBP07199 AGAP10P-201ENST00000454844 2418 ntBASIC20.64■□□□□ 0.89
CENPBP07199 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CENPBP07199 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CENPBP07199 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CENPBP07199 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms