Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CD4P01730 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD4P01730 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD4P01730 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD4P01730 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD4P01730 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CD4P01730 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.49■□□□□ 0.23
CD4P01730 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD4P01730 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.49■□□□□ 0.23
CD4P01730 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CD4P01730 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.48■□□□□ 0.23
CD4P01730 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.48■□□□□ 0.23
CD4P01730 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CD4P01730 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
CD4P01730 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.48■□□□□ 0.23
CD4P01730 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.48■□□□□ 0.23
CD4P01730 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 RN7SL258P-201ENST00000478664 300 ntBASIC16.48■□□□□ 0.23
CD4P01730 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.48■□□□□ 0.23
CD4P01730 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.48■□□□□ 0.23
CD4P01730 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 YRDCP1-201ENST00000621419 643 ntBASIC16.48■□□□□ 0.23
CD4P01730 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.48■□□□□ 0.23
CD4P01730 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 CICP11-201ENST00000434745 2827 ntBASIC16.48■□□□□ 0.23
CD4P01730 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.48■□□□□ 0.23
CD4P01730 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.48■□□□□ 0.23
CD4P01730 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 SSR4P1-203ENST00000599569 2260 ntBASIC16.48■□□□□ 0.23
CD4P01730 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CD4P01730 AL137783.1-201ENST00000623494 1896 ntBASIC16.48■□□□□ 0.23
CD4P01730 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CD4P01730 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CD4P01730 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CD4P01730 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 AL138725.1-201ENST00000407347 1314 ntBASIC16.47■□□□□ 0.23
CD4P01730 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CD4P01730 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CD4P01730 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.47■□□□□ 0.23
CD4P01730 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.47■□□□□ 0.23
CD4P01730 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.47■□□□□ 0.23
CD4P01730 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.47■□□□□ 0.23
CD4P01730 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.47■□□□□ 0.23
CD4P01730 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.47■□□□□ 0.23
CD4P01730 AC026803.1-201ENST00000569130 274 ntBASIC16.47■□□□□ 0.23
CD4P01730 AC103810.10-201ENST00000606504 343 ntBASIC16.47■□□□□ 0.23
CD4P01730 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CD4P01730 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.47■□□□□ 0.23
CD4P01730 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CD4P01730 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms