Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CTBP2P8-201ENST00000422584 1330 ntBASIC14.85□□□□□ -0.03
PDGFBP01127 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PDGFBP01127 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PDGFBP01127 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PDGFBP01127 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 ERP29P1-201ENST00000442902 706 ntBASIC14.84□□□□□ -0.03
PDGFBP01127 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.84□□□□□ -0.03
PDGFBP01127 RN7SL530P-201ENST00000485097 298 ntBASIC14.84□□□□□ -0.03
PDGFBP01127 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
PDGFBP01127 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 AC140113.1-201ENST00000603467 169 ntBASIC14.84□□□□□ -0.03
PDGFBP01127 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 LINC02199-201ENST00000506655 2702 ntBASIC14.84□□□□□ -0.03
PDGFBP01127 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 FTX-216ENST00000638985 1367 ntTSL 5 BASIC14.84□□□□□ -0.03
PDGFBP01127 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PDGFBP01127 PCDH8P1-201ENST00000428983 2773 ntBASIC14.84□□□□□ -0.03
PDGFBP01127 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PDGFBP01127 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
PDGFBP01127 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDGFBP01127 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PDGFBP01127 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.83□□□□□ -0.03
PDGFBP01127 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PDGFBP01127 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PDGFBP01127 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PDGFBP01127 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PDGFBP01127 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.83□□□□□ -0.04
PDGFBP01127 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 AL035414.1-201ENST00000451327 857 ntBASIC14.83□□□□□ -0.04
PDGFBP01127 AC063952.3-201ENST00000467756 308 ntBASIC14.83□□□□□ -0.04
PDGFBP01127 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.83□□□□□ -0.04
PDGFBP01127 AC093826.1-201ENST00000508655 993 ntBASIC14.83□□□□□ -0.04
PDGFBP01127 AC106047.2-201ENST00000511723 743 ntBASIC14.83□□□□□ -0.04
PDGFBP01127 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.83□□□□□ -0.04
PDGFBP01127 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.83□□□□□ -0.04
PDGFBP01127 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 AC021016.3-201ENST00000608367 477 ntBASIC14.83□□□□□ -0.04
PDGFBP01127 AC007250.1-201ENST00000608934 338 ntBASIC14.83□□□□□ -0.04
PDGFBP01127 BX088702.1-201ENST00000610784 235 ntBASIC14.83□□□□□ -0.04
PDGFBP01127 PTPN20CP-201ENST00000614090 920 ntBASIC14.83□□□□□ -0.04
PDGFBP01127 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.83□□□□□ -0.04
PDGFBP01127 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.83□□□□□ -0.04
PDGFBP01127 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PDGFBP01127 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PDGFBP01127 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms