Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CDKL5O76039 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKL5O76039 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDKL5O76039 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDKL5O76039 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.39
CDKL5O76039 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 MSTO2P-201ENST00000314835 1709 ntBASIC17.47■□□□□ 0.39
CDKL5O76039 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDKL5O76039 AC245100.3-201ENST00000441281 285 ntBASIC17.47■□□□□ 0.39
CDKL5O76039 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL5O76039 AC007389.4-201ENST00000454674 793 ntBASIC17.47■□□□□ 0.39
CDKL5O76039 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.47■□□□□ 0.39
CDKL5O76039 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.47■□□□□ 0.39
CDKL5O76039 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL5O76039 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKL5O76039 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.47■□□□□ 0.39
CDKL5O76039 AC145423.3-201ENST00000615987 467 ntBASIC17.47■□□□□ 0.39
CDKL5O76039 RPSAP52-203ENST00000622976 1023 ntBASIC17.47■□□□□ 0.39
CDKL5O76039 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 SALL4P5-201ENST00000419001 1760 ntBASIC17.47■□□□□ 0.39
CDKL5O76039 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CDKL5O76039 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CDKL5O76039 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKL5O76039 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDKL5O76039 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKL5O76039 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDKL5O76039 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.46■□□□□ 0.39
CDKL5O76039 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.46■□□□□ 0.39
CDKL5O76039 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 AL355864.2-201ENST00000447420 863 ntBASIC17.46■□□□□ 0.39
CDKL5O76039 FO681548.1-201ENST00000455617 1132 ntBASIC17.46■□□□□ 0.39
CDKL5O76039 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.46■□□□□ 0.39
CDKL5O76039 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 RN7SL48P-201ENST00000579283 293 ntBASIC17.46■□□□□ 0.39
CDKL5O76039 AC015936.2-201ENST00000593177 259 ntBASIC17.46■□□□□ 0.39
CDKL5O76039 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CDKL5O76039 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKL5O76039 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDKL5O76039 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDKL5O76039 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.46■□□□□ 0.38
CDKL5O76039 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CDKL5O76039 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
CDKL5O76039 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
CDKL5O76039 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKL5O76039 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms