Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ACTG1P3-201ENST00000431775 1114 ntBASIC14.14□□□□□ -0.15
HCN1O60741 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.14□□□□□ -0.15
HCN1O60741 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.14□□□□□ -0.15
HCN1O60741 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 ACA64.2-201ENST00000459014 129 ntBASIC14.14□□□□□ -0.15
HCN1O60741 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.14□□□□□ -0.15
HCN1O60741 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.14□□□□□ -0.15
HCN1O60741 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 AL359711.2-201ENST00000563105 872 ntBASIC14.14□□□□□ -0.15
HCN1O60741 AC010319.3-201ENST00000597028 470 ntBASIC14.14□□□□□ -0.15
HCN1O60741 AL049840.4-201ENST00000602422 811 ntBASIC14.14□□□□□ -0.15
HCN1O60741 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.14□□□□□ -0.15
HCN1O60741 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HCN1O60741 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.14□□□□□ -0.15
HCN1O60741 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.14□□□□□ -0.15
HCN1O60741 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.14□□□□□ -0.15
HCN1O60741 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HCN1O60741 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.13□□□□□ -0.15
HCN1O60741 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.13□□□□□ -0.15
HCN1O60741 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.13□□□□□ -0.15
HCN1O60741 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 AC079776.1-201ENST00000401540 1152 ntBASIC14.13□□□□□ -0.15
HCN1O60741 BOLA2P3-201ENST00000404566 256 ntBASIC14.13□□□□□ -0.15
HCN1O60741 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 KRT43P-201ENST00000434019 910 ntBASIC14.13□□□□□ -0.15
HCN1O60741 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
HCN1O60741 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.13□□□□□ -0.15
HCN1O60741 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.13□□□□□ -0.15
HCN1O60741 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.13□□□□□ -0.15
HCN1O60741 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.13□□□□□ -0.15
HCN1O60741 HILS1-202ENST00000545329 423 ntBASIC14.13□□□□□ -0.15
HCN1O60741 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.13□□□□□ -0.15
HCN1O60741 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 AC041040.2-201ENST00000622926 2899 ntBASIC14.13□□□□□ -0.15
HCN1O60741 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.13□□□□□ -0.15
HCN1O60741 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.13□□□□□ -0.15
HCN1O60741 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 AC005840.4-201ENST00000541242 2494 ntBASIC14.13□□□□□ -0.15
HCN1O60741 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HCN1O60741 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms