Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSI1O43347 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MSI1O43347 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
MSI1O43347 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.59■□□□□ 0.09
MSI1O43347 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSI1O43347 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSI1O43347 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MSI1O43347 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MSI1O43347 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
MSI1O43347 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
MSI1O43347 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MSI1O43347 AC003102.2-201ENST00000589195 1469 ntBASIC15.59■□□□□ 0.09
MSI1O43347 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MSI1O43347 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
MSI1O43347 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MSI1O43347 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MSI1O43347 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
MSI1O43347 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.58■□□□□ 0.09
MSI1O43347 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.58■□□□□ 0.09
MSI1O43347 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.58■□□□□ 0.09
MSI1O43347 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.58■□□□□ 0.09
MSI1O43347 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
MSI1O43347 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
MSI1O43347 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.58■□□□□ 0.08
MSI1O43347 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
MSI1O43347 HOMER2P2-201ENST00000451621 847 ntBASIC15.58■□□□□ 0.08
MSI1O43347 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.58■□□□□ 0.08
MSI1O43347 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.58■□□□□ 0.08
MSI1O43347 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.58■□□□□ 0.08
MSI1O43347 RN7SL560P-201ENST00000577943 264 ntBASIC15.58■□□□□ 0.08
MSI1O43347 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.58■□□□□ 0.08
MSI1O43347 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.58■□□□□ 0.08
MSI1O43347 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.58■□□□□ 0.08
MSI1O43347 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.58■□□□□ 0.08
MSI1O43347 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 AP000593.2-201ENST00000542775 1433 ntBASIC15.58■□□□□ 0.08
MSI1O43347 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.58■□□□□ 0.08
MSI1O43347 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.58■□□□□ 0.08
MSI1O43347 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
MSI1O43347 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MSI1O43347 AL023775.1-201ENST00000454907 1746 ntBASIC15.57■□□□□ 0.08
MSI1O43347 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.57■□□□□ 0.08
MSI1O43347 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 SALL4P5-201ENST00000419001 1760 ntBASIC15.57■□□□□ 0.08
MSI1O43347 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
MSI1O43347 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
MSI1O43347 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MSI1O43347 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 RN7SKP175-201ENST00000408472 289 ntBASIC15.57■□□□□ 0.08
MSI1O43347 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 AC007969.1-201ENST00000433675 447 ntBASIC15.57■□□□□ 0.08
MSI1O43347 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MSI1O43347 AL355994.2-201ENST00000447882 704 ntBASIC15.57■□□□□ 0.08
MSI1O43347 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.57■□□□□ 0.08
MSI1O43347 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.57■□□□□ 0.08
MSI1O43347 AL138725.1-201ENST00000407347 1314 ntBASIC15.57■□□□□ 0.08
MSI1O43347 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.57■□□□□ 0.08
MSI1O43347 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MSI1O43347 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms