Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 AL645937.2-201ENST00000396808 931 ntBASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 RN7SL48P-201ENST00000579283 293 ntBASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 AL118558.3-201ENST00000607414 1079 ntBASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA2E9PIF3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 BTBD6P1-201ENST00000412176 1267 ntBASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 FAM86HP-204ENST00000513466 959 ntBASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AL133338.1-201ENST00000565695 1517 ntBASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AC012508.2-201ENST00000567613 1472 ntBASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 KRT8P14-201ENST00000414254 1442 ntBASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NPIPA2E9PIF3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA2E9PIF3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms