Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 RN7SKP175-201ENST00000408472 289 ntBASIC13.25□□□□□ -0.29
NPIPB4C9JG80 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 RN7SL752P-201ENST00000463779 287 ntBASIC13.25□□□□□ -0.29
NPIPB4C9JG80 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 AC097359.2-201ENST00000604992 2389 ntBASIC13.25□□□□□ -0.29
NPIPB4C9JG80 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NPIPB4C9JG80 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 MYO15B-237ENST00000642007 4893 ntBASIC13.24□□□□□ -0.29
NPIPB4C9JG80 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 FKBP4P6-201ENST00000457486 1332 ntBASIC13.24□□□□□ -0.29
NPIPB4C9JG80 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 TPM3P8-201ENST00000330554 643 ntBASIC13.24□□□□□ -0.29
NPIPB4C9JG80 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 AC092933.1-201ENST00000393644 945 ntBASIC13.24□□□□□ -0.29
NPIPB4C9JG80 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 RN7SL837P-201ENST00000463010 287 ntBASIC13.24□□□□□ -0.29
NPIPB4C9JG80 AC106760.1-201ENST00000508690 800 ntBASIC13.24□□□□□ -0.29
NPIPB4C9JG80 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 AC106820.3-201ENST00000561653 397 ntBASIC13.24□□□□□ -0.29
NPIPB4C9JG80 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 AC139712.1-201ENST00000378256 1875 ntBASIC13.24□□□□□ -0.29
NPIPB4C9JG80 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NPIPB4C9JG80 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPB4C9JG80 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPB4C9JG80 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPB4C9JG80 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPB4C9JG80 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
NPIPB4C9JG80 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPB4C9JG80 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPB4C9JG80 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NPIPB4C9JG80 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms