Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC068587.8-201ENST00000641239 219 ntBASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 AC112693.3-201ENST00000624819 1983 ntBASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TBC1D3BA6NDS4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 RPL18P13-201ENST00000478088 569 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 RN7SL720P-201ENST00000488178 304 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 CHMP4BP1-201ENST00000556017 588 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AC015967.2-201ENST00000624092 234 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AC006435.4-201ENST00000625037 234 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AL356737.1-201ENST00000634391 234 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 AC006058.4-201ENST00000624016 1670 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 SALL4P5-201ENST00000419001 1760 ntBASIC15.19■□□□□ 0.02
TBC1D3BA6NDS4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 AC126365.1-201ENST00000578585 1514 ntBASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 ELK2AP-201ENST00000392510 1007 ntBASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.18■□□□□ 0.02
TBC1D3BA6NDS4 TLE1P1-201ENST00000422965 589 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms