Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AC134915.1-201ENST00000426461 574 ntBASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 RHOA-206ENST00000454011 889 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 UGT1A2P-201ENST00000454886 866 ntBASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 SERBP1P5-201ENST00000510079 1181 ntBASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AL391069.4-201ENST00000609583 481 ntBASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 DRD5P1-201ENST00000456605 1438 ntBASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AC007541.1-201ENST00000570282 1469 ntBASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 AL138799.1-201ENST00000448213 1675 ntBASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.98□□□□□ -0.65
TRGV1A0A0A0MS02 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 INTS4P2-202ENST00000614726 2019 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 USP35-204ENST00000530267 2419 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC104457.1-201ENST00000401024 814 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC087499.6-201ENST00000411576 835 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 DFFBP1-201ENST00000433250 979 ntBASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 FADS2-205ENST00000517839 469 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 INO80C-206ENST00000586489 594 ntTSL 3 BASIC10.97□□□□□ -0.65
TRGV1A0A0A0MS02 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms