Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 UNC93B7-201ENST00000509439 705 ntBASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 AC015910.1-201ENST00000579400 975 ntBASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 AL445228.2-201ENST00000605589 952 ntBASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
KCNIP3Q9Y2W7 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 PTPRVP-205ENST00000641549 5067 ntBASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 AL133267.1-201ENST00000398220 340 ntBASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
KCNIP3Q9Y2W7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AP3S2-216ENST00000617003 1561 ntBASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms