Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 DOC2GP-202ENST00000514950 1163 ntBASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 AC004840.1-201ENST00000636359 365 ntBASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 AL731571.1-201ENST00000617058 5428 ntBASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
POLR1DQ9Y2S0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
POLR1DQ9Y2S0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 FAM86LP-201ENST00000478302 853 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 RPL13AP25-201ENST00000484130 612 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 AL049840.4-201ENST00000602422 811 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 CLK3P2-201ENST00000427566 1453 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 AC007787.1-201ENST00000588095 1583 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 AC007292.2-201ENST00000593524 1812 ntBASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.52□□□□□ -0.25
POLR1DQ9Y2S0 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms