Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 MIR4538-201ENST00000581377 78 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 AP005019.2-201ENST00000615104 511 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 MIR6787-201ENST00000616675 61 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 COX11-210ENST00000639671 696 ntBASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.89□□□□□ -0.19
RPH3AQ9Y2J0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AC012441.1-201ENST00000446669 685 ntBASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AC106760.1-201ENST00000508690 800 ntBASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AP001889.1-201ENST00000525414 633 ntBASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 AC093525.8-201ENST00000624099 1342 ntBASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 MROH4P-201ENST00000431302 1578 ntBASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RPH3AQ9Y2J0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RPH3AQ9Y2J0 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms