Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 AC069218.1-201ENST00000435269 762 ntBASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 AL353637.1-201ENST00000451571 732 ntBASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 IGLV3-15-201ENST00000518356 244 ntBASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 MIR4754-201ENST00000582477 89 ntBASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAK1Q9UPV9 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 KRT8P21-201ENST00000430398 1491 ntBASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 U62317.3-201ENST00000608319 855 ntBASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 AL353726.2-201ENST00000623259 884 ntBASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 AC006453.1-201ENST00000636037 1257 ntBASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 AC006480.2-201ENST00000609770 1337 ntBASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAK1Q9UPV9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 ACE3P-201ENST00000423435 1973 ntBASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 MEG3_2.1-201ENST00000611456 105 ntBASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 AC007718.1-201ENST00000621078 280 ntBASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAK1Q9UPV9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAK1Q9UPV9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAK1Q9UPV9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRAK1Q9UPV9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRAK1Q9UPV9 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRAK1Q9UPV9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAK1Q9UPV9 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRAK1Q9UPV9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAK1Q9UPV9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAK1Q9UPV9 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAK1Q9UPV9 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAK1Q9UPV9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms