Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 AC091951.1-201ENST00000512854 2465 ntBASIC14.17□□□□□ -0.14
CTSFQ9UBX1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CTSFQ9UBX1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ZACNP1-201ENST00000612259 710 ntBASIC14.16□□□□□ -0.14
CTSFQ9UBX1 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 AL096828.3-201ENST00000615354 462 ntBASIC14.16□□□□□ -0.14
CTSFQ9UBX1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 INE2-201ENST00000630399 1874 ntBASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.16□□□□□ -0.14
CTSFQ9UBX1 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTSFQ9UBX1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AC013268.4-201ENST00000637413 2228 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AC067930.6-201ENST00000623257 4947 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 WASH3P-207ENST00000560956 1394 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 HIST2H2BB-201ENST00000449108 381 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AL591846.1-201ENST00000451736 433 ntBASIC14.15□□□□□ -0.14
CTSFQ9UBX1 AC104306.2-201ENST00000451877 341 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms