Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 SPDYE19P-201ENST00000338590 713 ntBASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 AL390955.2-201ENST00000603032 514 ntBASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 AC055811.4-201ENST00000624039 1754 ntBASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRTM1Q9HBL6 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 MRPS18AP1-201ENST00000414458 589 ntBASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 MEP1AP4-201ENST00000423244 1087 ntBASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 RRP7BP-205ENST00000566851 833 ntBASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 BX539320.1-201ENST00000623759 877 ntBASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 AL354702.1-201ENST00000442006 1960 ntBASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRTM1Q9HBL6 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRTM1Q9HBL6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms