Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AC078819.1-201ENST00000547454 765 ntBASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AC012085.1-201ENST00000548270 765 ntBASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 AL354989.2-201ENST00000435838 1540 ntBASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
SSBP3Q9BWW4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 SSR4P1-203ENST00000599569 2260 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 REXO1L4P-201ENST00000605109 1937 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 C18orf15-201ENST00000623680 2534 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC023157.3-201ENST00000619086 2088 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC026954.1-201ENST00000429771 1293 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AL590640.2-201ENST00000457038 527 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 RNA5SP412-201ENST00000516234 123 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC010328.2-201ENST00000597698 1111 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 ECM1P1-201ENST00000604092 1279 ntBASIC12.6□□□□□ -0.39
SSBP3Q9BWW4 ENPP7P14-201ENST00000621765 1040 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms