Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.49□□□□□ -0.57
VGLL1Q99990 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.49□□□□□ -0.57
VGLL1Q99990 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 AL023775.1-201ENST00000454907 1746 ntBASIC11.49□□□□□ -0.57
VGLL1Q99990 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.49□□□□□ -0.57
VGLL1Q99990 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VGLL1Q99990 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 AL928921.2-201ENST00000641325 2442 ntBASIC11.48□□□□□ -0.57
VGLL1Q99990 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 TOMM22P5-201ENST00000416399 439 ntBASIC11.48□□□□□ -0.57
VGLL1Q99990 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC11.48□□□□□ -0.57
VGLL1Q99990 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.48□□□□□ -0.57
VGLL1Q99990 AC010327.4-202ENST00000591484 748 ntBASIC11.48□□□□□ -0.57
VGLL1Q99990 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
VGLL1Q99990 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
VGLL1Q99990 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
VGLL1Q99990 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VGLL1Q99990 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 AC136759.1-202ENST00000530858 2194 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.47□□□□□ -0.57
VGLL1Q99990 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
VGLL1Q99990 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
VGLL1Q99990 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.47□□□□□ -0.57
VGLL1Q99990 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.47□□□□□ -0.57
VGLL1Q99990 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms