Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS2Q99743 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NPAS2Q99743 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS2Q99743 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS2Q99743 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
NPAS2Q99743 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPAS2Q99743 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPAS2Q99743 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.8□□□□□ -0.04
NPAS2Q99743 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NPAS2Q99743 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.8□□□□□ -0.04
NPAS2Q99743 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NPAS2Q99743 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.8□□□□□ -0.04
NPAS2Q99743 SDHAP3-202ENST00000515467 728 ntBASIC14.8□□□□□ -0.04
NPAS2Q99743 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.8□□□□□ -0.04
NPAS2Q99743 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
NPAS2Q99743 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 AC025048.3-201ENST00000590609 569 ntBASIC14.8□□□□□ -0.04
NPAS2Q99743 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.8□□□□□ -0.04
NPAS2Q99743 AC005702.4-201ENST00000618393 416 ntBASIC14.8□□□□□ -0.04
NPAS2Q99743 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.8□□□□□ -0.04
NPAS2Q99743 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 AC007541.1-201ENST00000570282 1469 ntBASIC14.8□□□□□ -0.04
NPAS2Q99743 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS2Q99743 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS2Q99743 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS2Q99743 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 REXO1L4P-201ENST00000605109 1937 ntBASIC14.8□□□□□ -0.04
NPAS2Q99743 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 AC152010.1-201ENST00000415779 2006 ntBASIC14.8□□□□□ -0.04
NPAS2Q99743 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPAS2Q99743 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS2Q99743 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.8□□□□□ -0.04
NPAS2Q99743 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPAS2Q99743 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NPAS2Q99743 SPDYE19P-201ENST00000338590 713 ntBASIC14.79□□□□□ -0.04
NPAS2Q99743 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NPAS2Q99743 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
NPAS2Q99743 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.79□□□□□ -0.04
NPAS2Q99743 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.79□□□□□ -0.04
NPAS2Q99743 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.79□□□□□ -0.04
NPAS2Q99743 DOC2GP-202ENST00000514950 1163 ntBASIC14.79□□□□□ -0.04
NPAS2Q99743 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NPAS2Q99743 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPAS2Q99743 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.79□□□□□ -0.04
NPAS2Q99743 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms