Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 FGD5P1-202ENST00000614866 2498 ntBASIC15.57■□□□□ 0.08
HAPLN3Q96S86 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 ACA64.2-201ENST00000459014 129 ntBASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 FTLP10-202ENST00000505798 471 ntBASIC15.57■□□□□ 0.08
HAPLN3Q96S86 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AC138466.3-201ENST00000619983 221 ntBASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AC006453.4-201ENST00000636949 1252 ntBASIC15.57■□□□□ 0.08
HAPLN3Q96S86 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HAPLN3Q96S86 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 KLF2P4-201ENST00000451959 1225 ntBASIC15.56■□□□□ 0.08
HAPLN3Q96S86 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 ECM1P1-201ENST00000604092 1279 ntBASIC15.56■□□□□ 0.08
HAPLN3Q96S86 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 RHOXF1P1-202ENST00000635473 501 ntBASIC15.56■□□□□ 0.08
HAPLN3Q96S86 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 AC018442.1-201ENST00000421439 2061 ntBASIC15.56■□□□□ 0.08
HAPLN3Q96S86 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HAPLN3Q96S86 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HAPLN3Q96S86 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
HAPLN3Q96S86 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HAPLN3Q96S86 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms