Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H4Q96RI1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H4Q96RI1 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H4Q96RI1 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NR1H4Q96RI1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
NR1H4Q96RI1 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 AC006504.4-201ENST00000592118 1568 ntBASIC14.22□□□□□ -0.13
NR1H4Q96RI1 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 STRCP1-201ENST00000509801 5328 ntBASIC14.22□□□□□ -0.13
NR1H4Q96RI1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 KHSRPP1-201ENST00000427983 1768 ntBASIC14.22□□□□□ -0.13
NR1H4Q96RI1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NR1H4Q96RI1 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 AP001972.5-201ENST00000624624 2338 ntBASIC14.21□□□□□ -0.13
NR1H4Q96RI1 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 AC106818.1-201ENST00000623223 3242 ntBASIC14.21□□□□□ -0.13
NR1H4Q96RI1 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 AC073957.3-201ENST00000609998 6758 ntBASIC14.21□□□□□ -0.13
NR1H4Q96RI1 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 REXO1L6P-202ENST00000619970 1078 ntBASIC14.21□□□□□ -0.13
NR1H4Q96RI1 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms