Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 AC003102.2-201ENST00000589195 1469 ntBASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC85AQ96PX6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 AL662890.1-201ENST00000396818 632 ntBASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 AC022217.1-201ENST00000521069 738 ntBASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 AP001505.2-201ENST00000616815 443 ntBASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 AC004923.1-202ENST00000642106 209 ntBASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 CICP6-201ENST00000457191 2729 ntBASIC18.58■□□□□ 0.56
CCDC85AQ96PX6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 TUBBP5-203ENST00000508529 1334 ntBASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 AC091046.1-201ENST00000331871 207 ntBASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 RPL18P13-201ENST00000478088 569 ntBASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 IMP3P2-201ENST00000489760 475 ntBASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 RN7SL774P-201ENST00000577467 290 ntBASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 AL645939.5-201ENST00000606834 243 ntBASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 AC091544.8-201ENST00000619490 361 ntBASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 AC138627.1-207ENST00000641560 1006 ntBASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC85AQ96PX6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 MROH4P-201ENST00000431302 1578 ntBASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 SALL4P5-201ENST00000419001 1760 ntBASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms