Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ECHDC3Q96DC8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ECHDC3Q96DC8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.98□□□□□ -0.01
ECHDC3Q96DC8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.98□□□□□ -0.01
ECHDC3Q96DC8 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ECHDC3Q96DC8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 AC010141.1-201ENST00000411585 623 ntBASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 HSPB1P2-201ENST00000448722 546 ntBASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 AP001002.3-201ENST00000623482 206 ntBASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ECHDC3Q96DC8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 ACTBP11-201ENST00000436287 1126 ntBASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 MTX1P1-201ENST00000440904 838 ntBASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 AC100850.1-201ENST00000506768 649 ntBASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 AC008825.2-201ENST00000603374 718 ntBASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 TNRC18P2-201ENST00000417666 2714 ntBASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ECHDC3Q96DC8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ECHDC3Q96DC8 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.96□□□□□ -0.02
ECHDC3Q96DC8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ECHDC3Q96DC8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
ECHDC3Q96DC8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ECHDC3Q96DC8 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
ECHDC3Q96DC8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ECHDC3Q96DC8 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ECHDC3Q96DC8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ECHDC3Q96DC8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms