Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 RN7SL530P-201ENST00000485097 298 ntBASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 FAM86B3P-203ENST00000523992 854 ntBASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 AC138701.2-201ENST00000553634 226 ntBASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 AC055811.3-201ENST00000584952 686 ntBASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 PKD1P5-201ENST00000532415 10291 ntBASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 AC105250.1-201ENST00000509378 2057 ntBASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.04■□□□□ 0.16
TRIM43Q96BQ3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 ACTBP7-201ENST00000418351 1124 ntBASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM43Q96BQ3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 COX20P1-201ENST00000366529 357 ntBASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 PGAM1P12-201ENST00000505622 748 ntBASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM43Q96BQ3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM43Q96BQ3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms